SeedSize [Depricated]


Nathan Miller, Logan Johnson, Kris Kvilekval and Dmitry Fedorov

Overview

Measured variables length, width, n-seeds, surface
Operating system windows, mac, linux
Licence freeware
Automation level automated
Plant requirements any
Export formats xml, csv
Other information Works in a web browser. Requires an internet connection. Works as a Bisque module.

Scientific article(s)

Mapping Quantitative Trait Loci Affecting Arabidopsis thaliana Seed Morphology Features Extracted Computationally From Images
Candace R. Moore,David S. Gronwall,Nathan D. Miller,Edgar P. Spalding
G3: Genes|Genomes|Genetics, 2013 View paper

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Description

This algorithm analyses images produced by a flat-bed scanner with seeds layed over the glass surface. Analysis outlines detected seeds and computes their geometrical properties. Works as a Bisque module into the iPlant infrastructure.


Source: SeedSize website

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