MorphoSnake
Overview
| Measured variables | length, n-branches, topology |
|---|---|
| Operating system | windows, mac, linux |
| Licence | open-source, freeware |
| Automation level | automated |
| Plant requirements | any |
| Export formats | csv |
| Other information |
Scientific article(s)
Quantification of complex modular architecture in plantsCatherine Reeb, Jaap Kaandorp, Fredrik Jansson, Nicolas Puillandre, Jean-Yves Dubuisson, Raphaël Cornette, Florian Jabbour, Yoan Coudert, Jairo Patiño, Jean-François Flot, Alain VanderpoortenNew Phytologist, 2018 View paper
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Description
The computer program MorphoSnake was developed to extract the skeleton and contours of a thallus and automatically acquire, at each level of organization, width, length, angle and sinuosity measurements.