LithoGraphX

Barbier de Reuille, Pierre, University of Bern, Switzerland

Overview

Measured variables	3D-reconstruction
Operating system	windows, linux
Licence	open-source, freeware
Automation level	semi-automated, manual
Plant requirements	any
Export formats	csv, ply, obj, vtk, stl
Other information

Scientific article(s)

MorphoGraphX: A platform for quantifying morphogenesis in 4D
Pierre Barbier de Reuille, Anne-Lise Routier-Kierzkowska, Daniel Kierzkowski, George W Bassel, Thierry Schüpbach, Gerardo Tauriello, Namrata Bajpai, Sören Strauss, Alain Weber, Annamaria Kiss, Agata Burian, Hugo Hofhuis, Aleksandra Sapala, Marcin Lipowczan, Maria B Heimlicher, Sarah Robinson, Emmanuelle M Bayer, Konrad Basler, Petros Koumoutsakos, Adrienne HK Roeder, Tinri Aegerter-Wilmsen, Naomi Nakayama, Miltos Tsiantis, Angela Hay, Dorota Kwiatkowska, Ioannis Xenarios, Cris Kuhlemeier, Richard S Smith
eLife, 2015 View paper

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Description

LithoGraphX is an open source software for scientists, by scientists. It aims at providing the plant science community with a solid, open, community developed, software for 3D data analysis and visualization.