MorphoGraphX

Richard Smith @ Max Plant Institute

Overview

Measured variables	3D-reconstruction, surface
Operating system	linux, windows
Licence	freeware, open-source
Automation level	semi-automated, manual, automated
Plant requirements	any
Export formats	csv, ply, obj, vtk, stl
Other information	-

Scientific article(s)

MorphoGraphX: A platform for quantifying morphogenesis in 4D
Pierre Barbier de Reuille, Anne-Lise Routier-Kierzkowska, Daniel Kierzkowski, George W Bassel, Thierry Schüpbach, Gerardo Tauriello, Namrata Bajpai, Sören Strauss, Alain Weber, Annamaria Kiss, Agata Burian, Hugo Hofhuis, Aleksandra Sapala, Marcin Lipowczan, Maria B Heimlicher, Sarah Robinson, Emmanuelle M Bayer, Konrad Basler, Petros Koumoutsakos, Adrienne HK Roeder, Tinri Aegerter-Wilmsen, Naomi Nakayama, Miltos Tsiantis, Angela Hay, Dorota Kwiatkowska, Ioannis Xenarios, Cris Kuhlemeier, Richard S Smith
eLife, 2015 View paper

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Description

MorphoGraphX is a free Linux application for the visualization and analysis of 3D biological datasets. Developed by researchers, it is primarily used for the analysis and quantification of 3D live-imaged confocal data sets. The main research interests adressed by MorphoGraphX are: - Shape extraction - Growth analysis - Signal quantification - Protein localization

Source: MorphoGraphX website