Phenotic
LISA @ Université d'Angers
Overview
| Measured variables | disease, surface |
|---|---|
| Operating system | windows, mac, linux |
| Licence | freeware, open-source |
| Automation level | automated |
| Plant requirements | any |
| Export formats | - |
| Other information | - |
Scientific article(s)
High throughput quantitative phenotyping of plant resistance using chlorophyll fluorescence image analysisCéline Rousseau, Etienne Belin, Edouard Bove, David Rousseau, Frédéric Fabre, Romain Berruyer, Jacky Guillaumès, Charles Manceau, Marie-Agnès Jacques, Tristan BoureauPlant Methods, 2013 View paper
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Description
Phenotic is an image analysis procedure for quantifying the leaf area impacted by the pathogen from chlorophyl fluorescence images. Based on the Fv/Fm values of each pixel of the image, a thresholding approach was developed to delimit diseased areas. In a perspective of high throughput phenotyping, the procedure was automated with the software R.
Source: BMC Plant Methods